All the Investigators at the NeuroGenomics and Informatics group are strongly committed to make publicly available all the raw and processed data, summary statistics, protocols and pipelines
Lab protocols
Protocols for lab-related activities (e.g. single nuclei extraction) can be found at protocols.io and through Dr. Karch specific page where they share protocols to generate IPSC-derived neural cells
Raw Data and Summary Statistics
Raw data for the manuscripts published by NGI investigators can be found in NIAGADS, and Synapse.
The information for each manuscript can be found here.
Pipelines and Code
We made our pipelines and code publicly available through Docker and github.com so other investigators can use it and/or replicate our findings.
More information here.
Resource Sharing Hub
We have developed multiple online tools and browser to visually explore the data we have generated.
More information here.