We publish the code and pipelines we used in our research in Github and in Docker

Github

You can download and explore our code and scripts here

Docker

We put most of our pipeline in Docker containers so they can be run in any computer environment.
We upload  our pipelines to Dockerhub,  so are processing, cleaning can be run in any computer environment. Docker containers have proved to increase deployment efficiency and reproducibility of analyses.

You can find our Dockers here.